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Lineage Report


root
. Homininae [primates]
. . Homo sapiens (man) ------------------------  265 89 hits [primates]         Homo sapiens nephrocan, pseudogene (NEPNP) on chromosome 6
. . Pan troglodytes ...........................  154  4 hits [primates]         Pan troglodytes BAC clone CH251-460B7 from Y, complete sequ
. . Pan paniscus (bonobo) .....................  134  1 hit  [primates]         PREDICTED: Pan paniscus collagen, type X, alpha 1 (COL10A1)
. . Gorilla gorilla gorilla (lowland gorilla) .  134  1 hit  [primates]         PREDICTED: Gorilla gorilla gorilla collagen, type X, alpha 
. synthetic construct -------------------------  134  6 hits [other sequences]  Synthetic construct Homo sapiens clone CCSBHm_00028828 COL1

Organism Report
  Homo sapiens (man) [primates] taxid 9606
 ref|NG_008306.1| Homo sapiens nephrocan, pseudogene (NEPNP...     265  2e-65
 emb|AL589939.2| Human DNA sequence from clone RP11-117O13 ...     265  2e-65
 gb|AC245256.1| Homo sapiens FOSMID clone COR2A-DD0002S6RNU...     198  2e-45
 gb|AC215208.3| Homo sapiens FOSMID clone ABC11-49442900D4 ...     198  2e-45
 emb|AL109933.25| Human DNA sequence from clone RP1-81D8 on...     196  9e-45
 gb|AC092325.2| Homo sapiens chromosome 16 clone RP11-14K3,...     158  4e-33
 gb|AC092357.2| Homo sapiens chromosome 16 clone RP11-332P2...     158  4e-33
 emb|AL096868.15| Human DNA sequence from clone RP3-493D19 ...     156  1e-32
 emb|AL390789.13| Human DNA sequence from clone RP11-572N15...     141  4e-28
 gb|AC244098.2| Homo sapiens BAC clone CH17-206F14 from chr...     139  1e-27
 gb|AC244099.2| Homo sapiens BAC clone CH17-227A24 from chr...     139  1e-27
 gb|AC016941.9| Homo sapiens Xq28 BAC RP5-869M20 (Roswell P...     139  1e-27
 ref|NG_023422.1| Homo sapiens succinyl-CoA:glutarate-CoA t...     137  5e-27
 gb|AC239641.3| Homo sapiens BAC clone RP11-1271P18 from ch...     137  5e-27
 emb|AL590395.4| Human DNA sequence from clone RP11-390H11 ...     137  5e-27
 emb|AL391807.13| Human DNA sequence from clone RP3-525N10 ...     137  5e-27
 emb|Z93931.1| Human DNA sequence from clone RP3-438G17 on ...     137  5e-27
 gb|AC006023.2| Homo sapiens PAC clone RP5-1147A1 from 7p14...     137  5e-27
 ref|NG_030438.1| Homo sapiens triadin (TRDN), RefSeqGene o...     135  2e-26
 gb|AC241820.2| Homo sapiens FOSMID clone ABC7-40280800J21 ...     135  2e-26
 gb|AC226152.3| Homo sapiens FOSMID clone ABC7-40638300I10 ...     135  2e-26
 emb|AL603648.3| Human DNA sequence from clone RP11-352K16 ...     135  2e-26
 emb|AL592428.6| Human DNA sequence from clone RP11-116P2 o...     135  2e-26
 emb|AL512430.14| Human DNA sequence from clone RP11-346C16...     135  2e-26
 emb|AL357274.9| Human DNA sequence from clone RP11-685P13 ...     135  2e-26
 emb|AL512490.13| Human DNA sequence from clone RP11-522A1 ...     135  2e-26
 emb|AL360232.24| Human DNA sequence from clone RP11-374I18...     135  2e-26
 emb|AL158035.14| Human DNA sequence from clone RP1-97J1 on...     135  2e-26
 emb|AL135903.12| Human DNA sequence from clone RP11-30P6 o...     135  2e-26
 emb|AL355498.10| Human DNA sequence from clone RP11-112L15...     135  2e-26
 emb|AL357352.11| Human DNA sequence from clone RP11-799G19...     135  2e-26
 emb|AL162382.13| Human DNA sequence from clone RP11-248J2 ...     135  2e-26
 emb|AL133408.7| Human DNA sequence from clone RP3-488C13 o...     135  2e-26
 emb|AL035694.8| Human DNA sequence from clone RP1-33L1 on ...     135  2e-26
 gb|AC022075.29| Homo sapiens 12 BAC RP11-277P12 (Roswell P...     135  2e-26
 gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete...     135  2e-26
 ref|XM_011535433.1| PREDICTED: Homo sapiens collagen, type...     134  7e-26
 ref|XM_011535432.1| PREDICTED: Homo sapiens collagen, type...     134  7e-26
 ref|XM_006715333.2| PREDICTED: Homo sapiens collagen, type...     134  7e-26
 emb|LO000005.2| Human DNA sequence from clone CH17-181I5 o...     134  7e-26
 ref|NG_021351.1| Homo sapiens 5'-nucleotidase domain conta...     134  7e-26
 ref|NG_021365.1| Homo sapiens Na+/K+ transporting ATPase i...     134  7e-26
 ref|NG_012147.1| Homo sapiens vanin 1 (VNN1), RefSeqGene o...     134  7e-26
 ref|NG_008032.1| Homo sapiens collagen, type X, alpha 1 (C...     134  7e-26
 gb|BC130621.1| Homo sapiens collagen, type X, alpha 1, mRN...     134  7e-26
 gb|BC130623.1| Homo sapiens collagen, type X, alpha 1, mRN...     134  7e-26
 ref|NM_000493.3| Homo sapiens collagen, type X, alpha 1 (C...     134  7e-26
 gb|AF191071.3| Homo sapiens chromosome 8 clone GS1-388D06 ...     134  7e-26
 emb|AL607077.4| Human DNA sequence from clone RP11-374I15 ...     134  7e-26
 emb|AL603833.3| Human DNA sequence from clone RP11-453O12 ...     134  7e-26
 emb|AL590725.5| Human DNA sequence from clone RP11-107L15 ...     134  7e-26
 emb|AL359646.19| Human DNA sequence from clone RP11-570O10...     134  7e-26
 emb|AL590544.7| Human DNA sequence from clone RP5-1194O12 ...     134  7e-26
 emb|AL357506.10| Human DNA sequence from clone RP11-327K21...     134  7e-26
 emb|AL590239.7| Human DNA sequence from clone RP11-466D24 ...     134  7e-26
 emb|AL512426.9| Human DNA sequence from clone RP11-94K8 on...     134  7e-26
 emb|AL356601.14| Human DNA sequence from clone RP11-486D20...     134  7e-26
 emb|AL391669.11| Human DNA sequence from clone RP11-43P8 o...     134  7e-26
 emb|AL360085.26| Human DNA sequence from clone RP11-505K1 ...     134  7e-26
 emb|AL450405.1| Human DNA sequence from clone RP11-632C17 ...     134  7e-26
 emb|AL445249.4| Human DNA sequence from clone RP11-123H21 ...     134  7e-26
 emb|AL360227.17| Human DNA sequence from clone RP11-428F8 ...     134  7e-26
 emb|AL132794.25| Human DNA sequence from clone RP3-343I24 ...     134  7e-26
 emb|AL121962.11| Human DNA sequence from clone RP1-136A11 ...     134  7e-26
 emb|AL121953.21| Human DNA sequence from clone RP3-493F7 o...     134  7e-26
 emb|AL139806.7| Human DNA sequence from clone RP3-455E7 on...     134  7e-26
 emb|AL133459.9| Human DNA sequence from clone RP3-522D12 o...     134  7e-26
 emb|AL136081.10| Human DNA sequence from clone RP5-886K12 ...     134  7e-26
 emb|AL133338.8| Human DNA sequence from clone RP3-467N11 o...     134  7e-26
 emb|AL133388.7| Human DNA sequence from clone RP1-257B21 o...     134  7e-26
 emb|AL050340.8| Human DNA sequence from clone RP5-995C14 o...     134  7e-26
 emb|AL078590.28| Human DNA sequence from clone RP11-557H15...     134  7e-26
 emb|AL121963.10| Human DNA sequence from clone RP1-136O14 ...     134  7e-26
 emb|AL031433.4| Human DNA sequence from clone RP1-171N11 o...     134  7e-26
 emb|AL035603.11| Human DNA sequence from clone RP1-179E13 ...     134  7e-26
 emb|AL032821.2| Human DNA sequence from clone RP1-55C23 on...     134  7e-26
 emb|Z95118.1| Human DNA sequence from clone RP3-354J5 on c...     134  7e-26
 emb|Z84488.1| Human DNA sequence from clone RP1-93H18 on c...     134  7e-26
 gb|S68531.1| COL10A1=type X collagen alpha 1 chain {C-term...     134  7e-26
 emb|X72580.1| Homo sapiens gene encoding collagen X, exon 3       134  7e-26
 emb|X98568.1| H.sapiens type X collagen gene                      134  7e-26
 emb|X60382.1| H.sapiens COL10A1 gene for collagen (alpha-1...     134  7e-26
 emb|X65120.1| H.sapiens COL10A1 gene for alpha 1 (X) collagen     134  7e-26
 gb|AC256306.1| Homo sapiens BAC clone CH17-25C3 from chrom...     132  3e-25
 ref|NM_001284271.1| Homo sapiens activating signal cointeg...     132  3e-25
 ref|NG_028214.1| Homo sapiens 5'-nucleotidase, ecto (CD73)...     132  3e-25
 ref|NG_023443.1| Homo sapiens eyes shut homolog (Drosophil...     132  3e-25
 ref|NG_011839.1| Homo sapiens adhesion G protein-coupled r...     132  3e-25
 gb|AC226112.2| Homo sapiens FOSMID clone ABC11-49394500P12...     132  3e-25

  Pan troglodytes [primates] taxid 9598
 gb|AC146455.3| Pan troglodytes BAC clone CH251-460B7 from ...     154  5e-32
 gb|AC147659.5| Pan troglodytes BAC clone CH251-425E12 from...     154  5e-32
 ref|XM_001161595.3| PREDICTED: Pan troglodytes collagen, t...     134  7e-26
 ref|XM_009451873.1| PREDICTED: Pan troglodytes collagen, t...     134  7e-26

  synthetic construct [other sequences] taxid 32630
 gb|KR711713.1| Synthetic construct Homo sapiens clone CCSB...     134  7e-26
 gb|KR711712.1| Synthetic construct Homo sapiens clone CCSB...     134  7e-26
 gb|KR711711.1| Synthetic construct Homo sapiens clone CCSB...     134  7e-26
 gb|KR711710.1| Synthetic construct Homo sapiens clone CCSB...     134  7e-26
 gb|KJ890949.1| Synthetic construct Homo sapiens clone ccsb...     134  7e-26
 gb|HQ258342.1| Synthetic construct Homo sapiens clone IMAG...     134  7e-26

  Pan paniscus (bonobo) [primates] taxid 9597
 ref|XM_003827563.2| PREDICTED: Pan paniscus collagen, type...     134  7e-26

  Gorilla gorilla gorilla (lowland gorilla) [primates] taxid 9595
 ref|XM_004044565.1| PREDICTED: Gorilla gorilla gorilla col...     134  7e-26


Taxonomy Report
root ........................   101 hits    5 orgs 
. Homininae .................    95 hits    4 orgs [cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae]
. . Homo sapiens ............    89 hits    1 orgs [Homo]
. . Pan .....................     5 hits    2 orgs 
. . . Pan troglodytes .......     4 hits    1 orgs 
. . . Pan paniscus ..........     1 hits    1 orgs 
. . Gorilla gorilla gorilla .     1 hits    1 orgs [Gorilla; Gorilla gorilla]
. synthetic construct .......     6 hits    1 orgs [other sequences; artificial sequences]